Gene detail information of Glyur001762s00040928 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21740.1 | 3.00E-150 | Protein of unknown function (DUF630 and DUF632) |
| NR | XP_004502488.1 | 0 | PREDICTED: uncharacterized protein LOC101512546 [Cicer arietinum] |
| trEMBL | tr|I1KAB5|I1KAB5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01762 | 6803 | 12297 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001762s00040928.1 | PF04783.7 | DUF630 | 1 | 59 | 1.10E-16 |
| Glyur001762s00040928.1 | PF04782.7 | DUF632 | 436 | 736 | 6.70E-102 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.502 |
| SRR1783600 | control | 5.573 |
| SRR1783602 | moderate drought stress | 3.779 |
| SRR1811619 | moderate drought stress | 3.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.991 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.833 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.723 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.598 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.606 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.073 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.124 |
| SRR2868004 | Drought Stress (root) | 13.618 |
| SRR2967015 | Control (root) | 15.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.758 |
| SRR9715740 | Leaf | 7.302 |
| SRR9715741 | Leaf | 9.340 |
| SRR9715739 | Root | 4.608 |
| SRR9715742 | Root | 16.222 |
| SRR9715743 | Root | 12.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.226 |
| SRR8749028 | MeJA induced 9h | 17.039 |
| SRR8749029 | MeJA induced 9h | 18.680 |
| SRR8749030 | Uninduced | 8.378 |
| SRR8749031 | Uninduced | 8.239 |
| SRR8749032 | Uninduced | 7.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.127 |
| SRR8400027 | Control - Root | 19.450 |