Gene detail information of Glyur001761s00036827 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14470.1 | 3.00E-14 | NB-ARC domain-containing disease resistance protein |
| NR | XP_003599016.1 | 8.63E-56 | Cc-nbs-lrr resistance protein [Medicago truncatula] |
| Swissprot | tr|Q7XA39|RGA4_SOLBU | 1.00E-31 | Putative disease resistance protein RGA4 |
| trEMBL | tr|G7IZD1|G7IZD1_MEDTR | 6.00E-56 | NB-ARC domain disease resistance protein {ECO:0000313|EMBL:AES69267.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01761 | 30587 | 31812 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001761s00036827.1 | PF00931.17 | NB-ARC | 50 | 112 | 8.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.800 |
| SRR1783600 | control | 0.496 |
| SRR1783602 | moderate drought stress | 0.632 |
| SRR1811619 | moderate drought stress | 0.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.083 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.766 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.157 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.888 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.243 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.491 |
| SRR2868004 | Drought Stress (root) | 6.023 |
| SRR2967015 | Control (root) | 5.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.257 |
| SRR9715740 | Leaf | 0.834 |
| SRR9715741 | Leaf | 1.147 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.360 |
| SRR9715743 | Root | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.354 |
| SRR8749028 | MeJA induced 9h | 0.954 |
| SRR8749029 | MeJA induced 9h | 1.278 |
| SRR8749030 | Uninduced | 0.397 |
| SRR8749031 | Uninduced | 0.190 |
| SRR8749032 | Uninduced | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.706 |
| SRR8400027 | Control - Root | 1.434 |