Gene detail information of Glyur001750s00036522.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60460.1 | 4.00E-50 | myb-like HTH transcriptional regulator family protein |
| NR | KEH29230.1 | 1.55E-169 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|A2WW87|GAM1_ORYSI | 1.00E-35 | Transcription factor GAMYB |
| trEMBL | tr|A0A072UTL8|A0A072UTL8_MEDTR | 6.00E-170 | Myb transcription factor {ECO:0000313|EMBL:KEH29230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01750 | 10933 | 12929 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001750s00036522.1 | PF13921.1 | Myb_DNA-bind_6 | 15 | 65 | 1.30E-11 |
| Glyur001750s00036522.1 | PF00249.26 | Myb_DNA-binding | 68 | 108 | 6.60E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.003 |
| SRR2868004 | Drought Stress (root) | 0.027 |
| SRR2967015 | Control (root) | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.917 |
| SRR9715740 | Leaf | 1.458 |
| SRR9715741 | Leaf | 0.776 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.328 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.595 |
| SRR8749028 | MeJA induced 9h | 0.105 |
| SRR8749029 | MeJA induced 9h | 0.371 |
| SRR8749030 | Uninduced | 0.341 |
| SRR8749031 | Uninduced | 3.061 |
| SRR8749032 | Uninduced | 4.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.032 |
| SRR8400027 | Control - Root | 0.096 |