Gene detail information of Glyur001748s00034953 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | ATCG01050.1 | 6.00E-05 | NADH-Ubiquinone/plastoquinone (complex I) protein |
| NR | AFK48586.1 | 4.57E-07 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9BBP3|NU4C_LOTJA | 8.00E-08 | NAD(P)H-quinone oxidoreductase chain 4, chloroplastic |
| trEMBL | tr|M0SRT5|M0SRT5_MUSAM | 1.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P24740_001} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01748 | 56459 | 57306 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.218 |
| SRR1783600 | control | 6.181 |
| SRR1783602 | moderate drought stress | 15.755 |
| SRR1811619 | moderate drought stress | 14.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.730 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.345 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.326 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.532 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.043 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.415 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.927 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.159 |
| SRR2868004 | Drought Stress (root) | 0.349 |
| SRR2967015 | Control (root) | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.521 |
| SRR9715740 | Leaf | 3.929 |
| SRR9715741 | Leaf | 2.959 |
| SRR9715739 | Root | 1.630 |
| SRR9715742 | Root | 0.504 |
| SRR9715743 | Root | 0.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.538 |
| SRR8749028 | MeJA induced 9h | 0.258 |
| SRR8749029 | MeJA induced 9h | 0.040 |
| SRR8749030 | Uninduced | 0.125 |
| SRR8749031 | Uninduced | 0.209 |
| SRR8749032 | Uninduced | 0.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.136 |
| SRR8400027 | Control - Root | 0.237 |