Gene detail information of Glyur001746s00033969.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02970.1 | 3.00E-149 | GDA1/CD39 nucleoside phosphatase family protein |
| NR | XP_004490061.1 | 0 | PREDICTED: probable apyrase 6-like [Cicer arietinum] |
| COG | YP_007567828.1 | 7.00E-16 | hypothetical protein LPE509_01285 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
| Swissprot | tr|O80612|APY6_ARATH | 0 | Probable apyrase 6 |
| trEMBL | tr|G7KF86|G7KF86_MEDTR | 0 | GDA1/CD39 nucleoside phosphatase family protein {ECO:0000313|EMBL:AES96732.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01746 | 21466 | 28342 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01510 | ENTPD1_3_8, CD39 | EC:3.6.1.5 | Purine metabolism | map00230 |
| Pyrimidine metabolism | map00240 | |||
| Epstein-Barr virus infection | map05169 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001746s00033969.1 | PF01150.12 | GDA1_CD39 | 66 | 469 | 1.10E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.401 |
| SRR1783600 | control | 17.749 |
| SRR1783602 | moderate drought stress | 19.623 |
| SRR1811619 | moderate drought stress | 19.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.791 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.557 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.547 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.603 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.973 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.488 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.946 |
| SRR2868004 | Drought Stress (root) | 37.844 |
| SRR2967015 | Control (root) | 38.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.260 |
| SRR9715740 | Leaf | 23.841 |
| SRR9715741 | Leaf | 30.666 |
| SRR9715739 | Root | 16.655 |
| SRR9715742 | Root | 26.070 |
| SRR9715743 | Root | 24.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.073 |
| SRR8749028 | MeJA induced 9h | 23.294 |
| SRR8749029 | MeJA induced 9h | 21.825 |
| SRR8749030 | Uninduced | 14.556 |
| SRR8749031 | Uninduced | 18.572 |
| SRR8749032 | Uninduced | 15.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.900 |
| SRR8400027 | Control - Root | 40.210 |