Gene detail information of Glyur001744s00038893 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN07613.1 | 5.20E-58 | hypothetical protein glysoja_019720 [Glycine soja] |
| trEMBL | tr|I1MZ82|I1MZ82_SOYBN | 1.00E-55 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01744 | 28807 | 31767 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.092 |
| SRR1783600 | control | 11.592 |
| SRR1783602 | moderate drought stress | 2.968 |
| SRR1811619 | moderate drought stress | 3.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.585 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.642 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.874 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.867 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.255 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.647 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.477 |
| SRR2868004 | Drought Stress (root) | 24.640 |
| SRR2967015 | Control (root) | 49.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.803 |
| SRR9715740 | Leaf | 5.103 |
| SRR9715741 | Leaf | 19.205 |
| SRR9715739 | Root | 0.726 |
| SRR9715742 | Root | 6.217 |
| SRR9715743 | Root | 5.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.021 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.065 |
| SRR8749030 | Uninduced | 0.144 |
| SRR8749031 | Uninduced | 0.100 |
| SRR8749032 | Uninduced | 0.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.176 |
| SRR8400027 | Control - Root | 4.224 |