Gene detail information of Glyur001738s00030228 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03773.1 | 8.00E-54 | HSP20-like chaperones superfamily protein |
| NR | XP_003550100.1 | 1.01E-93 | PREDICTED: uncharacterized protein At3g03773-like isoform 1 [Glycine max] |
| Swissprot | tr|Q6ID70|Y3377_ARATH | 5.00E-74 | Uncharacterized protein At3g03773 |
| trEMBL | tr|I1MW67|I1MW67_SOYBN | 4.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G24150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01738 | 25838 | 31164 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001738s00030228.1 | PF04969.11 | CS | 35 | 108 | 9.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.848 |
| SRR1783600 | control | 3.824 |
| SRR1783602 | moderate drought stress | 3.609 |
| SRR1811619 | moderate drought stress | 3.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.972 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.003 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.656 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.905 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.541 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.303 |
| SRR2868004 | Drought Stress (root) | 13.575 |
| SRR2967015 | Control (root) | 14.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.191 |
| SRR9715740 | Leaf | 17.393 |
| SRR9715741 | Leaf | 15.261 |
| SRR9715739 | Root | 9.754 |
| SRR9715742 | Root | 7.767 |
| SRR9715743 | Root | 7.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.437 |
| SRR8749028 | MeJA induced 9h | 16.592 |
| SRR8749029 | MeJA induced 9h | 28.248 |
| SRR8749030 | Uninduced | 7.491 |
| SRR8749031 | Uninduced | 3.025 |
| SRR8749032 | Uninduced | 8.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.689 |
| SRR8400027 | Control - Root | 21.736 |