Gene detail information of Glyur001736s00033405 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61570.1 | 5.00E-13 | translocase of the inner mitochondrial membrane 13 |
| NR | XP_003601435.1 | 3.03E-40 | Mitochondrial import inner membrane translocase subunit Tim13 [Medicago truncatula] |
| Swissprot | tr|Q9XH48|TIM13_ARATH | 2.00E-25 | Mitochondrial import inner membrane translocase subunit TIM13 |
| trEMBL | tr|G7J7C6|G7J7C6_MEDTR | 1.00E-40 | Import inner membrane translocase protein {ECO:0000313|EMBL:AES71686.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01736 | 30594 | 32252 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001736s00033405.1 | PF02953.10 | zf-Tim10_DDP | 22 | 82 | 4.80E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.156 |
| SRR1783600 | control | 17.977 |
| SRR1783602 | moderate drought stress | 7.980 |
| SRR1811619 | moderate drought stress | 7.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.963 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.372 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.299 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.720 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.256 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.727 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 84.317 |
| SRR2868004 | Drought Stress (root) | 51.479 |
| SRR2967015 | Control (root) | 39.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.123 |
| SRR9715740 | Leaf | 33.374 |
| SRR9715741 | Leaf | 25.205 |
| SRR9715739 | Root | 11.250 |
| SRR9715742 | Root | 18.185 |
| SRR9715743 | Root | 16.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 110.012 |
| SRR8749028 | MeJA induced 9h | 46.489 |
| SRR8749029 | MeJA induced 9h | 58.621 |
| SRR8749030 | Uninduced | 13.158 |
| SRR8749031 | Uninduced | 4.261 |
| SRR8749032 | Uninduced | 8.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 59.209 |
| SRR8400027 | Control - Root | 49.893 |