Gene detail information of Glyur001735s00030576 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G43790.1 | 2.00E-120 | zinc induced facilitator-like 2 |
| NR | XP_004515444.1 | 0 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like isoform X1 [Cicer arietinum] |
| COG | YP_002316380.1 | 8.00E-14 | major facilitator superfamily permease [Anoxybacillus flavithermus WK1] |
| Swissprot | tr|Q94BZ1|ZIFL1_ARATH | 1.00E-177 | Protein ZINC INDUCED FACILITATOR-LIKE 1 |
| trEMBL | tr|G7IVI0|G7IVI0_MEDTR | 0 | Zinc induced facilitator-like protein {ECO:0000313|EMBL:AES68618.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01735 | 11058 | 19275 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001735s00030576.1 | PF07690.11 | MFS_1 | 45 | 350 | 1.80E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.475 |
| SRR1783600 | control | 9.569 |
| SRR1783602 | moderate drought stress | 6.885 |
| SRR1811619 | moderate drought stress | 6.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.322 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.254 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.283 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 89.106 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.034 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.094 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.636 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.610 |
| SRR2868004 | Drought Stress (root) | 72.358 |
| SRR2967015 | Control (root) | 47.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.185 |
| SRR9715740 | Leaf | 3.942 |
| SRR9715741 | Leaf | 7.714 |
| SRR9715739 | Root | 4.578 |
| SRR9715742 | Root | 13.608 |
| SRR9715743 | Root | 12.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.235 |
| SRR8749028 | MeJA induced 9h | 116.790 |
| SRR8749029 | MeJA induced 9h | 84.741 |
| SRR8749030 | Uninduced | 208.090 |
| SRR8749031 | Uninduced | 155.538 |
| SRR8749032 | Uninduced | 139.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.226 |
| SRR8400027 | Control - Root | 15.406 |