Gene detail information of Glyur001734s00030852.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15330.1 | 4.00E-13 | cytochrome P450, family 705, subfamily A, polypeptide 1 |
| NR | XP_003622129.1 | 1.20E-20 | Licodione synthase [Medicago truncatula] |
| Swissprot | tr|P93149|C93B1_GLYEC | 5.00E-22 | Licodione synthase |
| trEMBL | tr|Q0ZM38|Q0ZM38_MEDTR | 4.00E-21 | Flavone synthase II {ECO:0000313|EMBL:ABC86159.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01734 | 56544 | 56766 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP705A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001734s00030852.1 | PF00067.17 | p450 | 12 | 66 | 4.90E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.931 |
| SRR1783600 | control | 3.809 |
| SRR1783602 | moderate drought stress | 4.985 |
| SRR1811619 | moderate drought stress | 4.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.705 |
| SRR2868004 | Drought Stress (root) | 11.616 |
| SRR2967015 | Control (root) | 8.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 16.369 |
| SRR9715742 | Root | 4.068 |
| SRR9715743 | Root | 6.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.570 |
| SRR8400027 | Control - Root | 7.406 |