Gene detail information of Glyur001734s00030848 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G46180.1 | 3.00E-148 | UDP-galactose transporter 5 |
| NR | XP_003539703.1 | 0 | PREDICTED: UDP-galactose/UDP-glucose transporter 5-like [Glycine max] |
| Swissprot | tr|Q6NMB6|UTR5B_ARATH | 0 | UDP-galactose/UDP-glucose transporter 5B |
| trEMBL | tr|I1LQU6|I1LQU6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G07170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01734 | 27707 | 32117 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001734s00030848.1 | PF08449.6 | UAA | 24 | 325 | 4.70E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.179 |
| SRR1783600 | control | 0.140 |
| SRR1783602 | moderate drought stress | 0.174 |
| SRR1811619 | moderate drought stress | 0.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.816 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.856 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.630 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.894 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.879 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.006 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.923 |
| SRR2868004 | Drought Stress (root) | 6.510 |
| SRR2967015 | Control (root) | 6.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.203 |
| SRR9715740 | Leaf | 0.832 |
| SRR9715741 | Leaf | 0.814 |
| SRR9715739 | Root | 0.047 |
| SRR9715742 | Root | 0.593 |
| SRR9715743 | Root | 0.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.804 |
| SRR8749028 | MeJA induced 9h | 0.515 |
| SRR8749029 | MeJA induced 9h | 0.787 |
| SRR8749030 | Uninduced | 0.477 |
| SRR8749031 | Uninduced | 0.338 |
| SRR8749032 | Uninduced | 0.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.908 |
| SRR8400027 | Control - Root | 2.952 |