Gene detail information of Glyur001733s00027625 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17010.1 | 7.00E-44 | |
| NR | XP_006586624.1 | 7.99E-98 | PREDICTED: uncharacterized protein LOC100306691 isoform X1 [Glycine max] |
| trEMBL | tr|I1L1Y1|I1L1Y1_SOYBN | 3.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G09200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01733 | 27631 | 30560 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.338 |
| SRR1783600 | control | 35.225 |
| SRR1783602 | moderate drought stress | 23.007 |
| SRR1811619 | moderate drought stress | 23.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.751 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.048 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.735 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.034 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.222 |
| SRR2868004 | Drought Stress (root) | 44.649 |
| SRR2967015 | Control (root) | 40.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.576 |
| SRR9715740 | Leaf | 42.510 |
| SRR9715741 | Leaf | 38.880 |
| SRR9715739 | Root | 1.132 |
| SRR9715742 | Root | 9.901 |
| SRR9715743 | Root | 8.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 116.904 |
| SRR8749028 | MeJA induced 9h | 70.313 |
| SRR8749029 | MeJA induced 9h | 93.839 |
| SRR8749030 | Uninduced | 70.049 |
| SRR8749031 | Uninduced | 33.148 |
| SRR8749032 | Uninduced | 22.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.178 |
| SRR8400027 | Control - Root | 45.871 |