Gene detail information of Glyur001733s00027620 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24400.1 | 4.00E-22 | SAUR-like auxin-responsive protein family |
| NR | AFK41725.1 | 3.80E-70 | unknown [Lotus japonicus] |
| Swissprot | tr|P33082|AXX15_SOYBN | 9.00E-16 | Auxin-induced protein X15 |
| trEMBL | tr|I3SN83|I3SN83_LOTJA | 1.00E-70 | Uncharacterized protein {ECO:0000313|EMBL:AFK41725.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01733 | 2353 | 2847 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001733s00027620.1 | PF02519.9 | Auxin_inducible | 52 | 137 | 9.50E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.992 |
| SRR1783600 | control | 2.023 |
| SRR1783602 | moderate drought stress | 1.076 |
| SRR1811619 | moderate drought stress | 1.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.571 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.710 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.211 |
| SRR2868004 | Drought Stress (root) | 4.220 |
| SRR2967015 | Control (root) | 3.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.062 |
| SRR9715741 | Leaf | 0.119 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.338 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.151 |
| SRR8749030 | Uninduced | 0.617 |
| SRR8749031 | Uninduced | 0.612 |
| SRR8749032 | Uninduced | 0.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.731 |
| SRR8400027 | Control - Root | 1.172 |