Gene detail information of Glyur001732s00023326 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05950.1 | 8.00E-89 | |
| NR | XP_004507329.1 | 0 | PREDICTED: uncharacterized protein LOC101495369 [Cicer arietinum] |
| Swissprot | tr|Q03878|GRP1_DAUCA | 8.00E-09 | Glycine-rich RNA-binding protein |
| trEMBL | tr|K7LPG9|K7LPG9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G13701.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01732 | 36739 | 45858 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.962 |
| SRR1783600 | control | 5.064 |
| SRR1783602 | moderate drought stress | 3.526 |
| SRR1811619 | moderate drought stress | 3.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.518 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.474 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.444 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.422 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.577 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.739 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.201 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.477 |
| SRR2868004 | Drought Stress (root) | 8.706 |
| SRR2967015 | Control (root) | 8.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.069 |
| SRR9715740 | Leaf | 2.283 |
| SRR9715741 | Leaf | 2.042 |
| SRR9715739 | Root | 0.288 |
| SRR9715742 | Root | 1.728 |
| SRR9715743 | Root | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.739 |
| SRR8749028 | MeJA induced 9h | 4.030 |
| SRR8749029 | MeJA induced 9h | 4.746 |
| SRR8749030 | Uninduced | 2.337 |
| SRR8749031 | Uninduced | 1.346 |
| SRR8749032 | Uninduced | 2.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.582 |
| SRR8400027 | Control - Root | 8.583 |