Gene detail information of Glyur001727s00039820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN20169.1 | 6.69E-31 | hypothetical protein glysoja_045951 [Glycine soja] |
| trEMBL | tr|V7C4Q6|V7C4Q6_PHAVU | 1.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:ESW25119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01727 | 54676 | 55575 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.856 |
| SRR1783600 | control | 21.347 |
| SRR1783602 | moderate drought stress | 20.773 |
| SRR1811619 | moderate drought stress | 20.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.850 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.165 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.544 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.965 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.386 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.444 |
| SRR2868004 | Drought Stress (root) | 5.797 |
| SRR2967015 | Control (root) | 6.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.935 |
| SRR9715740 | Leaf | 2.787 |
| SRR9715741 | Leaf | 4.148 |
| SRR9715739 | Root | 3.263 |
| SRR9715742 | Root | 6.998 |
| SRR9715743 | Root | 7.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.832 |
| SRR8749028 | MeJA induced 9h | 5.919 |
| SRR8749029 | MeJA induced 9h | 3.916 |
| SRR8749030 | Uninduced | 0.377 |
| SRR8749031 | Uninduced | 0.170 |
| SRR8749032 | Uninduced | 0.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.686 |
| SRR8400027 | Control - Root | 8.620 |