Gene detail information of Glyur001727s00039817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25170.1 | 3.00E-12 | Uncharacterised conserved protein (UCP012943) |
| NR | XP_004513930.1 | 1.30E-112 | PREDICTED: uncharacterized protein LOC101489918 isoform X2 [Cicer arietinum] |
| trEMBL | tr|I3RZS7|I3RZS7_MEDTR | 2.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:AFK33519.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01727 | 40202 | 42134 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.497 |
| SRR1783600 | control | 7.851 |
| SRR1783602 | moderate drought stress | 10.978 |
| SRR1811619 | moderate drought stress | 10.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.584 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.504 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.746 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.663 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.822 |
| SRR2868004 | Drought Stress (root) | 16.935 |
| SRR2967015 | Control (root) | 15.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.367 |
| SRR9715740 | Leaf | 20.284 |
| SRR9715741 | Leaf | 11.502 |
| SRR9715739 | Root | 7.071 |
| SRR9715742 | Root | 8.728 |
| SRR9715743 | Root | 8.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.088 |
| SRR8749028 | MeJA induced 9h | 4.288 |
| SRR8749029 | MeJA induced 9h | 3.788 |
| SRR8749030 | Uninduced | 2.124 |
| SRR8749031 | Uninduced | 1.476 |
| SRR8749032 | Uninduced | 2.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.996 |
| SRR8400027 | Control - Root | 20.278 |