Gene detail information of Glyur001726s00035060 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11650.1 | 2.00E-55 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003603637.1 | 1.08E-72 | Monoglyceride lipase [Medicago truncatula] |
| COG | YP_003571913.1 | 2.00E-18 | lysophospholipase [Salinibacter ruber M8] |
| Swissprot | tr|Q9C942|CSE_ARATH | 4.00E-13 | Caffeoylshikimate esterase |
| trEMBL | tr|I1K9F5|I1K9F5_SOYBN | 1.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G09150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01726 | 52582 | 52999 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.826 |
| SRR1783600 | control | 10.301 |
| SRR1783602 | moderate drought stress | 8.978 |
| SRR1811619 | moderate drought stress | 9.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.531 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.939 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.708 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.173 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.662 |
| SRR2868004 | Drought Stress (root) | 3.194 |
| SRR2967015 | Control (root) | 4.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.813 |
| SRR9715740 | Leaf | 13.962 |
| SRR9715741 | Leaf | 18.774 |
| SRR9715739 | Root | 19.103 |
| SRR9715742 | Root | 15.820 |
| SRR9715743 | Root | 14.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.823 |
| SRR8749028 | MeJA induced 9h | 0.465 |
| SRR8749029 | MeJA induced 9h | 0.393 |
| SRR8749030 | Uninduced | 1.303 |
| SRR8749031 | Uninduced | 1.432 |
| SRR8749032 | Uninduced | 1.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.491 |
| SRR8400027 | Control - Root | 7.755 |