Gene detail

Gene detail information of Glyur001720s00031699

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G54280.2	myosin 2
NR	XP_004487658.1	PREDICTED: myosin-J heavy chain-like isoform X1 [Cicer arietinum]
Swissprot	tr\|F4K0A6\|MYO2_ARATH	Myosin-2
trEMBL	tr\|I1M3E0\|I1M3E0_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G35790.1}

Sequence

Transcript Sequence

>Glyur001720s00031699.1
CAAAGATGATGTTATCAGCTTCACCATCTTCCCTTGCGAGAAGCTCGTTAGAAGAGATGCTTGAGTCGCTTCGCCGGAGAGATGAGGAGGAGAAGCCGAAGGACCTGCCGCCGGCATTGCCGGCGAGACCGACGTCGAGGGGTAGGTTACCGCCGGCGAGAAGGTCGTTGCCTAAGAGCTTCAAGGTTGATGAGAATGAAGAGAGCAAGATGAAGAAGGAAAAGGGGCACAGGAGGAAAGGTAGTTTTGCTAGCAAGAAGATGAAGATGGATTTGGAATCCCCTTACGTGGCCAAATCAGAAGAGAAAATGGTTGCTGAACAAACTTCTTCACCTAGTCCTGTTTCAACTCCTGCTGATTCTTCTGCTGCTGCTGCTGATTCTGTGACTCCACCATCTCAGGAATTGGAGGATGACAATGTTGCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAGTGGGGACTGGGAACGATACAGTCAACTTCAGGAGAGCAAGCATCTGTTTCACTCTCAAANGGAAACGTTATGAAAGTGGCCAGAACAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGCTATTTAAATGAGCCCTCAGTTCTTCACAATCTTCGGTTTAGATATTCTCAGGATATGATTTATAGTAAAGCGGGGCCAATTTTAATTGCACTCAATCCCTTCAAAGATGTACAGATTTATGGAAATGATTATGTCTCTTCTTATAGGATGAAATCTATTGATAGTCCTCATGTTTATGCCATGGCAGATGCAGCTTATAATCAGATGATAGGAGATGAAGTAAATCAGTCCATTATAATAAGTGGCGAGAGTGGAGCTGGGAAAACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATGTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAANTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAACGGGGAAAATTTGTGGCGCTAAAATTCAAACCTGTAAGCATGTTCAATCAAGAGTTGTTCAACTGGCCAATGGCGAGAGGTCGTATCACATATTTTATCAACTTTGTGCTGGATCTTCACCTGATCTTAAAGAGAGACTGAATCTTANAGTGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTGATGATGCTAAAAAATTTCATAGGCTAATGAAAGCGTTGGATGTTGTTCAAATGAGCAACGAGGATCAAGAGCGGGTCTTTAAGATGCTCACTGCGATATTATGGCTAGGAAATATATCATTCCAATTTACTGATAACGAAAATCACATTGAGGTGGTGAACGATGAAGCTGTAACCACTGCTGCTTTGCTGATGGGTTGCAGTTCCCAGGAGTTAATGACAGCTTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAAACATTGACATTGCGGCAGGCAATTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTTGGTAAACGATGTACTGGGAGATCCATAAGCATCCTTGACATTTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTATTTAAACTTGAGCAGGAGGACTACGAACTAGATGGCGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGATGAGGAATCAAATTTCCCCAGGGCCACTGATCTAACATTTGCCAACAAGCTTAGGCAGCACCTTCATGCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGGTTTCCGTGTTCGTCATTATGCAGGGGAGGTTTTGTACGATACAAACGGCTTTCTAGAAAAGAACAGAGATCCACTGCCTTCTGATTCCATTCAACTACTGTCGTCATGTAGTTGTGAACTGCTGCAGTTGTTCTCCAAGACGCTTAACCAGTCTCANAAGCAACCAAATTCCCCGCATATAGGTGCTCATGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACGACCCCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGCATATATGATGAAGATCTNGTCCTACAGCAACTCAAGTGTTGCGGGGTATTGGAGGTTGTTCGGATTTCACGGGCTGGATATCCTACTCGAATGACACACCAAGAGTTTGCCAGAAGGTATGGGTTTCTGCTCACTGAGGCCAACACATCTCAAGATCCATTGAGCATCTCAGTTGCTGTTTTGCAACAATTCAATATCCCTCCTGAAATGTACCTAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTTGGCGCACTGGAGGATAGGCGAAAACAGCTTTTGCAGGGAATACTTGGGGTTCAAAAAAGCTTNCGTGGTCATCAAGCTCGCAGTTATTACAATGAACTTAAGAATGGAGCAACAACTTTACAATCATTTGTTCGTGGAGAAATTGCGAGAAGGAAATATGGTGTTATGCTGAAGTCTTCTCTAACTATTTCTTCTGAAAAAATTGAGGAGATACAGGCTATCATAATACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGCATACTAGTAGCTTGAATAAGTTAAAGAAATGTCCCGAAAATGCAAGATCTAGGCGAAAGTCACGTGTGAAGATGCCAGAAGTTAAGGAAGTGTCCAATGAGCGGGTCCAGAATCTACCTTCGGCTTTGGCAGAACTCCAAAGGCGGGTTGTCANGGCTGAAGCAACTATAGAGCAAAAGGAAGAGGAAAATGCTGAGTTGAGGGAACAGCTAAAACAATTTCAGAGAAGGTGGATGGAATATGAGACAAAGATGAAAACAATGGAGGAAATGTGGCAAAAACAAATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCCGAGCATGCCACTGGCCCACCTGTAAGACATGATGTTGCATCACCTTTCTGCTATGATTCCGAGGATGCTACTTCCATGGGATCTCGAACACCTCGAACCCCCGGTTCGAGCACGCCTTTGAAGTATTCTAGTAGTCTTTCTGAAGTCAGAGCAACAGCNAGAGATACTAATGGCACTCTGAACAATCTGATGAAGGAATTCGAGCAGCGCAGACAGACCTTTGATGGCGATGCCAAAGCCTTGCTAACAGCAGGGCAATCTACAAATACTAATAATTCCATTGAAGAACTTAGGAAAATCAAACACAGGTTTGAGGGGTGGAAGAAAGAATACAAGGCTAGATTGAGGGAGACAAAAGCAAGACTTCTCAAGAATTCGGAAATGGATAAGAGTCGGCGGAAATGGTGGGGGATGTTGAGTTCTAGAGCACTATAGCTTCATTGTTTGGAACAACAGCTGATAAGCTTCCACCGCACGGTCACTCAAAAGCTATAAGAGATAGCTTTTGNGGTGTGCAAGCCTCGGGACGCGAGAATATCACAAACCAAACACACAGAGCATCAAGGTTACAAATGTTTCTCTTTGCCAAAAGTGTGTATAAAAGTTGAGGAAGATCAAAGCAAAAATGGCAAGAAATGNTTGTTGTCATAAAAGTGTCTTTCCTTTTTTAAGGGAACATTCTTTAAGTGTTTTTTACTGTTGTACTAGTTGGTGAAGGGAAAACAAATTTGTATATCTACCAATTTTGTGACATGGTGGAAGGTGTGTGTATAGTTGTAGACTTATTGTAGGTTTTTATAGTTGTATTGATTAGTCTAGTTTGGTCATGTATATTCTGTTGTTACTGATGTATGTAATGTAAAACTCTGCCCCCGAGGGTATAAATAGTGAGTGTTCATATCTTCAAT

Protein Sequence

>Glyur001720s00031699.1
MMLSASPSSLARSSLEEMLESLRRRDEEEKPKDLPPALPARPTSRGRLPPARRSLPKSFKVDENEESKMKKEKGHRRKGSFASKKMKMDLESPYVAKSEEKMVAEQTSSPSPVSTPADSSAAAADSVTPPSQELEDDNVAYFIKKKLHVWCRQPRGKWGLGTIQSTSGEQASVSLSXGNVMKVARTELLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYSKAGPILIALNPFKDVQIYGNDYVSSYRMKSIDSPHVYAMADAAYNQMIGDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNVILEAFGNAKTSRNDXSSRFGKLIEIHFSTTGKICGAKIQTCKHVQSRVVQLANGERSYHIFYQLCAGSSPDLKERLNLXVASEYKYLNQSDCMTIDGVDDAKKFHRLMKALDVVQMSNEDQERVFKMLTAILWLGNISFQFTDNENHIEVVNDEAVTTAALLMGCSSQELMTALSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTFANKLRQHLHANPCFKGERGRGFRVRHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCSCELLQLFSKTLNQSXKQPNSPHIGAHDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLTEANTSQDPLSISVAVLQQFNIPPEMYLVGFTKLYLRTGQVGALEDRRKQLLQGILGVQKSXRGHQARSYYNELKNGATTLQSFVRGEIARRKYGVMLKSSLTISSEKIEEIQAIIILQSVIRGWLVRRHTSSLNKLKKCPENARSRRKSRVKMPEVKEVSNERVQNLPSALAELQRRVVXAEATIEQKEEENAELREQLKQFQRRWMEYETKMKTMEEMWQKQMASLQMSLAAARSSLASEHATGPPVRHDVASPFCYDSEDATSMGSRTPRTPGSSTPLKYSSSLSEVRATARDTNGTLNNLMKEFEQRRQTFDGDAKALLTAGQSTNTNNSIEELRKIKHRFEGWKKEYKARLRETKARLLKNSEMDKSRRKWWGMLSSRAL

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01720	5656	15935	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001720s00031699.1	PF00063.16	Myosin_head	199	855	4.50E-223
Glyur001720s00031699.1	PF00612.22	IQ	895	912	0.0089
Glyur001720s00031699.1	PF00612.22	IQ	931	948	0.00026

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.701
SRR1783600	control	8.753
SRR1783602	moderate drought stress	10.356
SRR1811619	moderate drought stress	10.387

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.546
DRR006520	Root Summer glycyrrhizin high producing strain	15.396
DRR006521	Root Winter glycyrrhizin high producing strain	3.989
DRR006522	Root Winter glycyrrhizin high producing strain	3.832
DRR006523	Root Summer glycyrrhizin low producing strain	6.378
DRR006524	Root Summer glycyrrhizin low producing strain	6.516
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.207
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.177

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.904
SRR2868004	Drought Stress (root)	28.082
SRR2967015	Control (root)	32.724

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.962
SRR9715740	Leaf	20.116
SRR9715741	Leaf	14.748
SRR9715739	Root	1.311
SRR9715742	Root	17.261
SRR9715743	Root	14.459

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.593
SRR8749028	MeJA induced 9h	8.575
SRR8749029	MeJA induced 9h	2.531
SRR8749030	Uninduced	3.680
SRR8749031	Uninduced	2.189
SRR8749032	Uninduced	1.730

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.438
SRR8400027	Control - Root	26.392