Gene detail information of Glyur001716s00035283 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01720.1 | 1.00E-23 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| NR | XP_004502479.1 | 5.70E-76 | PREDICTED: NAC domain-containing protein 2-like [Cicer arietinum] |
| Swissprot | tr|Q39013|NAC2_ARATH | 1.00E-34 | NAC domain-containing protein 2 |
| trEMBL | tr|C7AFG2|C7AFG2_CICAR | 2.00E-76 | NAC family transcription factor 5 {ECO:0000313|EMBL:ACS94038.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01716 | 44234 | 44719 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.227 |
| SRR1783600 | control | 26.633 |
| SRR1783602 | moderate drought stress | 28.998 |
| SRR1811619 | moderate drought stress | 27.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 171.213 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 171.099 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 222.739 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 221.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 440.860 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 444.359 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 520.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 512.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.065 |
| SRR2868004 | Drought Stress (root) | 195.144 |
| SRR2967015 | Control (root) | 257.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2432.582 |
| SRR9715740 | Leaf | 2292.976 |
| SRR9715741 | Leaf | 3006.469 |
| SRR9715739 | Root | 393.533 |
| SRR9715742 | Root | 601.610 |
| SRR9715743 | Root | 559.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 931.704 |
| SRR8749028 | MeJA induced 9h | 1249.151 |
| SRR8749029 | MeJA induced 9h | 755.174 |
| SRR8749030 | Uninduced | 257.867 |
| SRR8749031 | Uninduced | 594.606 |
| SRR8749032 | Uninduced | 617.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 156.258 |
| SRR8400027 | Control - Root | 110.684 |