Gene detail information of Glyur001715s00041611 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21510.1 | 2.00E-06 | |
| NR | KEH35365.1 | 3.02E-20 | hypothetical protein MTR_3g088735 [Medicago truncatula] |
| trEMBL | tr|A0A072VB49|A0A072VB49_MEDTR | 1.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:KEH35365.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01715 | 28108 | 28557 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.131 |
| SRR1783600 | control | 1.322 |
| SRR1783602 | moderate drought stress | 1.371 |
| SRR1811619 | moderate drought stress | 1.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.749 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.023 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.830 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.341 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.094 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.492 |
| SRR2868004 | Drought Stress (root) | 4.794 |
| SRR2967015 | Control (root) | 5.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.021 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.776 |
| SRR9715743 | Root | 1.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.379 |
| SRR8400027 | Control - Root | 4.236 |