Gene detail information of Glyur001712s00031461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57650.1 | 3.00E-142 | lysophosphatidyl acyltransferase 2 |
| NR | XP_003535857.1 | 0 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Glycine max] |
| Swissprot | tr|Q9XFW4|LPAT2_BRANA | 0 | 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 |
| trEMBL | tr|I1L9X2|I1L9X2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G12560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01712 | 48752 | 56618 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13523 | AGPAT3_4 | EC:2.3.1.51 2.3.1.- | Glycerolipid metabolism | map00561 |
| Glycerophospholipid metabolism | map00564 | |||
| Phospholipase D signaling pathway | map04072 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001712s00031461.1 | PF01553.16 | Acyltransferase | 80 | 228 | 1.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.622 |
| SRR1783600 | control | 17.471 |
| SRR1783602 | moderate drought stress | 13.255 |
| SRR1811619 | moderate drought stress | 12.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.982 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.757 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.304 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 43.965 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.170 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.271 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.582 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.409 |
| SRR2868004 | Drought Stress (root) | 39.367 |
| SRR2967015 | Control (root) | 35.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.581 |
| SRR9715740 | Leaf | 27.027 |
| SRR9715741 | Leaf | 35.695 |
| SRR9715739 | Root | 16.432 |
| SRR9715742 | Root | 22.798 |
| SRR9715743 | Root | 21.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.759 |
| SRR8749028 | MeJA induced 9h | 15.969 |
| SRR8749029 | MeJA induced 9h | 22.820 |
| SRR8749030 | Uninduced | 30.039 |
| SRR8749031 | Uninduced | 50.472 |
| SRR8749032 | Uninduced | 66.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.274 |
| SRR8400027 | Control - Root | 36.732 |