Gene detail information of Glyur001712s00031460 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57630.1 | 0 | exostosin family protein |
| NR | KEH41607.1 | 0 | exostosin family protein [Medicago truncatula] |
| Swissprot | tr|Q10SX7|GT31_ORYSJ | 3.00E-27 | Probable glucuronosyltransferase Os03g0107900 |
| trEMBL | tr|A0A072VIF3|A0A072VIF3_MEDTR | 0 | Exostosin family protein {ECO:0000313|EMBL:KEH41607.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01712 | 33136 | 40786 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001712s00031460.1 | PF03016.10 | Exostosin | 381 | 728 | 5.40E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.374 |
| SRR1783600 | control | 5.213 |
| SRR1783602 | moderate drought stress | 5.375 |
| SRR1811619 | moderate drought stress | 5.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.430 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.547 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.141 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.027 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.666 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.337 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.498 |
| SRR2868004 | Drought Stress (root) | 14.903 |
| SRR2967015 | Control (root) | 14.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.826 |
| SRR9715740 | Leaf | 6.932 |
| SRR9715741 | Leaf | 8.608 |
| SRR9715739 | Root | 1.312 |
| SRR9715742 | Root | 8.049 |
| SRR9715743 | Root | 5.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.695 |
| SRR8749028 | MeJA induced 9h | 7.626 |
| SRR8749029 | MeJA induced 9h | 6.138 |
| SRR8749030 | Uninduced | 5.472 |
| SRR8749031 | Uninduced | 5.731 |
| SRR8749032 | Uninduced | 6.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.999 |
| SRR8400027 | Control - Root | 15.309 |