Gene detail information of Glyur001709s00034629 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51050.1 | 5.00E-176 | Mitochondrial substrate carrier family protein |
| NR | KHN28603.1 | 0 | Calcium-binding mitochondrial carrier protein SCaMC-1-A [Glycine soja] |
| Swissprot | tr|O04619|ADNT1_ARATH | 2.00E-63 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|I1N833|I1N833_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G28020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01709 | 46222 | 52492 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001709s00034629.1 | PF13833.1 | EF-hand_8 | 67 | 99 | 2.20E-05 |
| Glyur001709s00034629.1 | PF13499.1 | EF-hand_7 | 104 | 189 | 1.00E-08 |
| Glyur001709s00034629.1 | PF00153.22 | Mito_carr | 228 | 314 | 1.10E-23 |
| Glyur001709s00034629.1 | PF00153.22 | Mito_carr | 325 | 414 | 2.20E-23 |
| Glyur001709s00034629.1 | PF00153.22 | Mito_carr | 422 | 505 | 4.60E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.259 |
| SRR1783600 | control | 2.313 |
| SRR1783602 | moderate drought stress | 1.723 |
| SRR1811619 | moderate drought stress | 1.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.442 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.321 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.429 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.211 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.670 |
| SRR2868004 | Drought Stress (root) | 14.474 |
| SRR2967015 | Control (root) | 8.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.923 |
| SRR9715740 | Leaf | 13.762 |
| SRR9715741 | Leaf | 21.866 |
| SRR9715739 | Root | 2.758 |
| SRR9715742 | Root | 8.466 |
| SRR9715743 | Root | 7.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.620 |
| SRR8749028 | MeJA induced 9h | 8.013 |
| SRR8749029 | MeJA induced 9h | 4.826 |
| SRR8749030 | Uninduced | 7.769 |
| SRR8749031 | Uninduced | 4.027 |
| SRR8749032 | Uninduced | 4.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.902 |
| SRR8400027 | Control - Root | 10.167 |