Gene detail

Gene detail information of Glyur001706s00038540

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G20430.1	0	Subtilase family protein
NR	XP_004488203.1	0	PREDICTED: subtilisin-like protease SDD1-like [Cicer arietinum]
COG	YP_003380257.1	1.00E-90	protease-associated PA domain-containing protein [Kribbella flavida DSM 17836]
Swissprot	tr\|O64495\|SDD1_ARATH	8.00E-98	Subtilisin-like protease SDD1 {ECO:0000303\|PubMed:10809670} (Precursor)
trEMBL	tr\|I1MHR3\|I1MHR3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G21920.1}

Sequence

Transcript Sequence

>Glyur001706s00038540.1
CAATTTTCTTATTCTCCTTTTGAATAAACAAAAACGTTCAAATTCACAAAACCCAAGAAGAAAAAGAAGACCCTTTGCTTGCAGATTCTCTACACTACACTATACACTCACTCATCCAGCTATATTAATACTCTGCAACTGCNACACTCTCTCCCTAAAAAGGTTCTTGCTTTATCACTGTCTCTCAGGTTCTATCTATCTTCCCTTTTAACAAAGCACATTGCTTTTGGGGGTGTGTCCTTCACTGAACTGAGTTTAATTAAGGGAAAGTTTTGAACTTGAGAGAATGGAGCATGTGGGCTGGTGAAGAATTTGTTAACTCAGTTCCTTCTTCATACTTGGATTTCAACTGGGTCTTCAGTTTTTTTTTTCTTTTGTACTTTTNTTGGCTTCCCCTAAGAAACCCTGATGGGGAGGAACATAGATTTGGCACATTTGGTGGTGGTGCTTTGCTTTTGGATGCTTGTGCCTTGTTCGTGCCAACAAGATGATTTAGATAATAATAATAATAATGCTACTACTACGGCTGTGTATGTTGTTACTCTGAGACAAGCTCCTGCTTCTCATAACCTTGGTGAGTTGAAAAGTGTTGATAATGGCTTCACACATGATGCTGCTGCCCCTGGGAGAACTCAATTCCACAAACCAAGATATGGCAATATTACAAAGACAGATAAGAGATATGGATCTTATGTTGCCCGAGTTCATGATTCTTTGTTGAAGAAAGTTTTGAAAGGAGAGAAATATCTGAAGCTCTATAGCTACCATTATTTGATAAATGGATTTGCTGTGCTGGTTACGCAACAGCAGGCAGAGAAACTATCAAGGAGCAGTGAGGTGTCCAATGTGGTTATGGATTTTTCAGTAAGAACTGCAACTACCCATACTCCACAATTTCTGGGTCTGCCACAGGGAGCATGGTCTCAAGGTGGTGGGTTTGAAACTGCTGGAGAAGGAATTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACACCCGAGTTTTGGTGATAATAAATCTGAACATGTGTATCCTGTTCCTGCTCACTTTTCTGGTATATGCGAGGTTACTCGGGATTTTCCATCTGGCTCTTGCAATAGGAAACTTGTTGGGGCCCGCCATTTTGCGGCATCTGCTATANCCAGGGGAATATTTAATTCATCTCAAGACTATGCTTCTCCCTTTGATGGCGATGGCCATGGCACGCATACAGCATCTGTTGCAGCAGGAAACCATGGGATTCCAGTGATTGTTGCGGGGCATCATTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTGTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTCGTGGCAGCTATTGACCAGGCAGCTCAGGACGGGGTTGACATAATAAGCTTGTCAATCACTCCTAATAGGCGCCCTCCTGGTGTTGCAACTTTCTTCAACCCGATAGACATGGCATTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTAGTGCAAGCTGCAGGAAATACCGGGCCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTAACTGTTGGTGCTGCCTCTCATGACCGGCTTTATGGAAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGGCACAGATGAAAACAAACTTTATAAACTAGTTCATGCGCACGATGCTTTGAACAATGACACAATGGTTGCTAATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAGTTCAATCGGGATTTGATCCAGGGGAACCTCTTGATCTGCAGCTATTCAATTCGATTTGTGCTGGGGCTTTCCACCATCAAACATGCCTCAGAAACAGCCAAGAACCTTAGTGCAGCTGGTGTTGTCTTCTACATGGATCCTTATGTAATTGGTTTTCAGCTCAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTTCATCTACAAATGACTCCAAGATTTTAATGCAATACTACAATTCTTCACTGGAAATAGACGCGGTTACAAAGAAAGTCGTTAAATTTGGGGCTGTTGCCACTATCTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTCATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCCGACATCTTGAAACCTAACTTGTTAGCTCCTGGAAATTTCATATGGGCTGGCTGGAGTTCTCTTGGCACTGAGTCGGTTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATATTGCGGGTCTTGCTGCGCTAATCAAGCAAAAGTTCCCGAATTTCAGTCCGGCAGCAATTGGTTCTGCACTTTCTACTACTGCTTCAATGTATGACAAGAGTGGTGGACTGATAATGGCTCAGCGATCATATGCCTCTCCGGACTTAAACCAATCTCCAGCTACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCATTAAATCCTGGTTTGATTTTTGATTCAAGTTATGATGATTACATGTCATTTCTATGTGGCATCAATGGTTCAGCTCCAGTGGTGGTAAACTACACTGGTCAAAATTGTTTGCTCTATAACAATTCCACTCTATATGGTCCTGATCTGAACCTGCCTTCAATCACCATATCAAAGCTGAACCAATCTAGAGTAGTGCAGAGGACGGTACAAAACGTCGCGGCAGGGAACGAAACATACAGTGTTGGTTGGAATGCTCCTNTTGGGGTCTCAGTGAAAGTGTCTCCAACCCATTTTTCTATTGCCAATGGTGAGAGGCAAGTCTTGTCGGTGCTCTTGAATGCAACCACTAACAGCACTGTTTCCAGTTTTGGGAGGATTGCGCTCTTTGGTGATCATGGTCATGTTGTCAACATTCCTCTCTCAGTCATGGTTAAAATCTCATACTATAATAACATTACTACTAGCTAGCTAACAGGGATGGATAGCATTTATTTATTCTTGTTTNGAAGTAATCCATGTAGTATTTGTGTTTTTTTTTCTTCTTTTTTTGGGTCCCAAAAATGTATTAAACTATTTATTCAATTCATTATCATGTAAAGTTGTTACAGGTTCTCCTTGTATATTTACTAGTATTGATGACCCGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01706	25990	34897	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001706s00038540.1	PF05922.11	Inhibitor_I9	41	156	2.80E-21
Glyur001706s00038540.1	PF00082.17	Peptidase_S8	185	705	1.40E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.733
SRR1783600	control	11.702
SRR1783602	moderate drought stress	5.320
SRR1811619	moderate drought stress	5.322

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.969
DRR006520	Root Summer glycyrrhizin high producing strain	13.766
DRR006521	Root Winter glycyrrhizin high producing strain	1.035
DRR006522	Root Winter glycyrrhizin high producing strain	0.998
DRR006523	Root Summer glycyrrhizin low producing strain	7.968
DRR006524	Root Summer glycyrrhizin low producing strain	7.867
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.350
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.327

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.608
SRR2868004	Drought Stress (root)	18.749
SRR2967015	Control (root)	20.087

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.216
SRR9715740	Leaf	5.329
SRR9715741	Leaf	3.986
SRR9715739	Root	13.963
SRR9715742	Root	16.963
SRR9715743	Root	16.333

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.195
SRR8749028	MeJA induced 9h	1.557
SRR8749029	MeJA induced 9h	1.596
SRR8749030	Uninduced	0.121
SRR8749031	Uninduced	0.048
SRR8749032	Uninduced	0.198

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.415
SRR8400027	Control - Root	37.813