Gene detail

Gene detail information of Glyur001700s00031783

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G31020.2	1.00E-135	alpha/beta-Hydrolases superfamily protein
NR	XP_007154914.1	0	hypothetical protein PHAVU_003G158300g [Phaseolus vulgaris]
COG	YP_724418.1	8.00E-47	hypothetical protein Tery_5033 [Trichodesmium erythraeum IMS101]
trEMBL	tr\|V7CC28\|V7CC28_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW26908.1}

Sequence

Transcript Sequence

>Glyur001700s00031783.1
GTGAAAGGGTGAGAGAAGGGAGGCAAAAGACGAACGAATGGTGTTCCAGCTCAGCTCACCCGCTTAGGTCGGATCTATTCTCTGCCACTCTTCACTTTCCTCCTTCGGTTTCGTCAGAAGCCACTTGGAATTGGAATTCCAACACCCAACATCTTTCCTTTCCATCATCCCAAGTAAAATAACTTCGCAACATCCCAACAACACCAACTCTCTGCAAAAACAAAAAACATCCTCTCTCTCAAACAACATAGTAACCGCAATAAANAAAAAAAAACATTTTATTTTCCTTCCTTTTTTATTTTTTCTAAATACAAATAACGGAAATAGAAAAGGATAGAAGAAGAAGAAGAATAGGATAAGAACAACCCAAAAAAAGAAAAAGAAAATCCGAACCTGAACCTGAACCTTCTCCCCTGATACCATCCATCGTTTTGGTTCATGCTGAAAATCAATCACCACACAAACTGGGTATATCCATTTTTTCTTCTTCTGTGTATGTAAATGGGCAATGTGACGGGAACAGTGGCGGCGAAATTCGCGTTTTTCCCGCCAGAGCCACCAACGTACGACGTTTACAAGGAGGAAGATGGGAGGGTAGTGTTCTCCGGCGTAACCGCCGACAGAAACGTGGACGTTCACATTCTGGACACAAAGGGTGGGAACAAGATCGTTGCCACCTTATGGAAACACCCATTTGCGAGGTTCACCTTCTTGTACTCTCACGGTAATGCCGCTGACTTGGGTCAAATGCTCGACCTCTTCATCGAGCTCAGAGCTCACCTCCGTGTCAACATCATGTGCTATGACTATTCGGGATATGGAGCTTCTACGGGTAAGCCATCTGAGTTCAACACGTATTACGACATAGAGGCTGTATATAATTGTTTGAAGAGCGAATATGGAATCAAGCAAGAAGAGTTAATTCTGTATGGTCAATCGGTTGGAAGTGGGCCCACGCTACATTTGGCTTCTAAATTGCCGAAGTTGAGAGGTGTTGTACTTCACAGTGCCATCCTTTCAGGACTANGGGTCTTGTACCCTGTTAAGATGACATTTTGGTTTGACATATTCAAAAATATAGACAAAATTCGGTATGTCAACTGTCCAGTGTTTGTTATACATGGAACAGATGATGATATTGTTGATTGGTCTCATGGAAAGCGATTGTGGGAACTCTCCAAGGAAAAATACGATCCCTTGTGGGTTAAGGGGGGAGGTCATTGCAACCTTGAAACTTTCCCCGAGTACATCAAGTACTTGCGCAAGTTCCTTAACGCGATGGAGAAACTATCACTCACAAGACAGTCAAACAAACAACTCACTCAAAATCCTAGTATTACTGAATCCAAACATAACAAATGCTTAAGATTTGGTAAGAAAATAGGTTGATCTTTTTTATGTTAGGAATCAGAATCACGGTTTGATTGAAGGTTGAGTCAAACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01700	19065	22406	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001700s00031783.1	PF12695.2	Abhydrolase_5	70	241	3.00E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.242
SRR1783600	control	0.203
SRR1783602	moderate drought stress	0.226
SRR1811619	moderate drought stress	0.236

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.225
DRR006520	Root Summer glycyrrhizin high producing strain	0.148
DRR006521	Root Winter glycyrrhizin high producing strain	0.308
DRR006522	Root Winter glycyrrhizin high producing strain	0.300
DRR006523	Root Summer glycyrrhizin low producing strain	0.922
DRR006524	Root Summer glycyrrhizin low producing strain	0.991
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.633
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.642

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.997
SRR2868004	Drought Stress (root)	1.689
SRR2967015	Control (root)	2.050

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.096
SRR9715740	Leaf	2.481
SRR9715741	Leaf	1.967
SRR9715739	Root	0.240
SRR9715742	Root	0.385
SRR9715743	Root	0.470

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.093
SRR8749028	MeJA induced 9h	1.922
SRR8749029	MeJA induced 9h	3.198
SRR8749030	Uninduced	1.974
SRR8749031	Uninduced	1.864
SRR8749032	Uninduced	3.638

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.566
SRR8400027	Control - Root	1.011