Gene detail information of Glyur001697s00030390 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67050.1 | 5.00E-11 | |
| NR | XP_003541349.2 | 7.33E-63 | PREDICTED: uncharacterized protein LOC100810949 [Glycine max] |
| trEMBL | tr|I1LX36|I1LX36_SOYBN | 3.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G07750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01697 | 11793 | 13061 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.453 |
| SRR1783600 | control | 2.164 |
| SRR1783602 | moderate drought stress | 1.392 |
| SRR1811619 | moderate drought stress | 1.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.444 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.371 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.409 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.439 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.528 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.107 |
| SRR2868004 | Drought Stress (root) | 12.976 |
| SRR2967015 | Control (root) | 7.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.827 |
| SRR9715740 | Leaf | 0.904 |
| SRR9715741 | Leaf | 3.180 |
| SRR9715739 | Root | 0.495 |
| SRR9715742 | Root | 1.738 |
| SRR9715743 | Root | 0.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.676 |
| SRR8749028 | MeJA induced 9h | 6.415 |
| SRR8749029 | MeJA induced 9h | 2.951 |
| SRR8749030 | Uninduced | 23.161 |
| SRR8749031 | Uninduced | 44.314 |
| SRR8749032 | Uninduced | 25.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.852 |
| SRR8400027 | Control - Root | 4.388 |