Gene detail information of Glyur001696s00038372 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52510.1 | 2.00E-27 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004506957.1 | 5.29E-45 | PREDICTED: haloalkane dehalogenase-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|I3SHK7|I3SHK7_LOTJA | 9.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:AFK39749.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01696 | 38593 | 55377 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.295 |
| SRR1783600 | control | 3.319 |
| SRR1783602 | moderate drought stress | 3.394 |
| SRR1811619 | moderate drought stress | 3.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.975 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.838 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.922 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.924 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.676 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.551 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.926 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.933 |
| SRR2868004 | Drought Stress (root) | 5.563 |
| SRR2967015 | Control (root) | 4.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.146 |
| SRR9715740 | Leaf | 101.756 |
| SRR9715741 | Leaf | 103.439 |
| SRR9715739 | Root | 2.468 |
| SRR9715742 | Root | 7.665 |
| SRR9715743 | Root | 5.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.331 |
| SRR8749028 | MeJA induced 9h | 1.356 |
| SRR8749029 | MeJA induced 9h | 0.340 |
| SRR8749030 | Uninduced | 0.713 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.550 |
| SRR8400027 | Control - Root | 22.996 |