Gene detail information of Glyur001685s00029133 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11591.1 | 4.00E-06 | |
| NR | XP_003600226.1 | 1.58E-26 | hypothetical protein MTR_3g055700 [Medicago truncatula] |
| trEMBL | tr|G7J1G4|G7J1G4_MEDTR | 1.00E-26 | Transmembrane protein, putative {ECO:0000313|EMBL:AES70477.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01685 | 37970 | 38173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.411 |
| SRR1783600 | control | 20.561 |
| SRR1783602 | moderate drought stress | 20.607 |
| SRR1811619 | moderate drought stress | 20.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.932 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.633 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.119 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.673 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.957 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.765 |
| SRR2868004 | Drought Stress (root) | 9.657 |
| SRR2967015 | Control (root) | 7.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.442 |
| SRR9715740 | Leaf | 7.575 |
| SRR9715741 | Leaf | 4.716 |
| SRR9715739 | Root | 11.226 |
| SRR9715742 | Root | 8.655 |
| SRR9715743 | Root | 6.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.738 |
| SRR8749028 | MeJA induced 9h | 13.582 |
| SRR8749029 | MeJA induced 9h | 19.140 |
| SRR8749030 | Uninduced | 16.120 |
| SRR8749031 | Uninduced | 4.380 |
| SRR8749032 | Uninduced | 16.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.461 |
| SRR8400027 | Control - Root | 18.747 |