Gene detail information of Glyur001684s00039971 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22160.1 | 6.00E-32 | Protein of unknown function (DUF581) |
| NR | AFK38834.1 | 5.51E-59 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SEZ2|I3SEZ2_LOTJA | 2.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:AFK38834.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01684 | 11982 | 13580 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001684s00039971.1 | PF04570.9 | DUF581 | 67 | 122 | 1.00E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 122.753 |
| SRR1783600 | control | 123.274 |
| SRR1783602 | moderate drought stress | 219.832 |
| SRR1811619 | moderate drought stress | 217.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 100.745 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 100.520 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.099 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 203.165 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 196.484 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.217 |
| SRR2868004 | Drought Stress (root) | 70.313 |
| SRR2967015 | Control (root) | 72.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.015 |
| SRR9715740 | Leaf | 53.974 |
| SRR9715741 | Leaf | 39.332 |
| SRR9715739 | Root | 58.775 |
| SRR9715742 | Root | 71.993 |
| SRR9715743 | Root | 67.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.031 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.019 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 147.075 |
| SRR8400027 | Control - Root | 143.631 |