Gene detail information of Glyur001682s00037304 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14410.2 | 1.00E-48 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004497838.1 | 1.29E-126 | PREDICTED: transcription factor bHLH104-like [Cicer arietinum] |
| Swissprot | tr|Q8L467|BH104_ARATH | 2.00E-68 | Transcription factor bHLH104 |
| trEMBL | tr|I1NER6|I1NER6_SOYBN | 2.00E-121 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G22010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01682 | 32309 | 35236 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.592 |
| SRR1783600 | control | 21.111 |
| SRR1783602 | moderate drought stress | 14.808 |
| SRR1811619 | moderate drought stress | 14.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.541 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 51.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 64.116 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 60.965 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.774 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.105 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 115.602 |
| SRR2868004 | Drought Stress (root) | 120.938 |
| SRR2967015 | Control (root) | 102.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 72.375 |
| SRR9715740 | Leaf | 78.358 |
| SRR9715741 | Leaf | 87.491 |
| SRR9715739 | Root | 18.451 |
| SRR9715742 | Root | 39.068 |
| SRR9715743 | Root | 33.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 107.821 |
| SRR8749028 | MeJA induced 9h | 171.668 |
| SRR8749029 | MeJA induced 9h | 299.684 |
| SRR8749030 | Uninduced | 142.595 |
| SRR8749031 | Uninduced | 265.147 |
| SRR8749032 | Uninduced | 356.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 79.593 |
| SRR8400027 | Control - Root | 76.849 |