Gene detail information of Glyur001681s00028854 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004500930.1 | 7.09E-58 | PREDICTED: uncharacterized protein LOC101503743 [Cicer arietinum] |
| trEMBL | tr|I1JT24|I1JT24_SOYBN | 1.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01681 | 38160 | 38849 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.779 |
| SRR1783600 | control | 14.009 |
| SRR1783602 | moderate drought stress | 10.626 |
| SRR1811619 | moderate drought stress | 10.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.247 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.282 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.843 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.125 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.917 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.900 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.290 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.724 |
| SRR2868004 | Drought Stress (root) | 50.127 |
| SRR2967015 | Control (root) | 48.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.323 |
| SRR9715740 | Leaf | 31.854 |
| SRR9715741 | Leaf | 16.706 |
| SRR9715739 | Root | 2.920 |
| SRR9715742 | Root | 3.666 |
| SRR9715743 | Root | 3.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.112 |
| SRR8749028 | MeJA induced 9h | 5.233 |
| SRR8749029 | MeJA induced 9h | 8.071 |
| SRR8749030 | Uninduced | 2.697 |
| SRR8749031 | Uninduced | 6.689 |
| SRR8749032 | Uninduced | 12.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.889 |
| SRR8400027 | Control - Root | 15.427 |