Gene detail information of Glyur001676s00030615 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31560.1 | 8.00E-09 | high chlorophyll fluorescence 153 |
| NR | XP_002268521.1 | 1.15E-22 | PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera] |
| trEMBL | tr|F6GX98|F6GX98_VITVI | 4.00E-23 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB44584.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01676 | 6889 | 9509 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.533 |
| SRR1783600 | control | 3.165 |
| SRR1783602 | moderate drought stress | 3.796 |
| SRR1811619 | moderate drought stress | 4.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.436 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.443 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.035 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.789 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.982 |
| SRR2868004 | Drought Stress (root) | 2.530 |
| SRR2967015 | Control (root) | 3.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.145 |
| SRR9715740 | Leaf | 0.300 |
| SRR9715741 | Leaf | 0.049 |
| SRR9715739 | Root | 0.227 |
| SRR9715742 | Root | 0.098 |
| SRR9715743 | Root | 0.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.161 |
| SRR8749028 | MeJA induced 9h | 10.907 |
| SRR8749029 | MeJA induced 9h | 18.697 |
| SRR8749030 | Uninduced | 5.451 |
| SRR8749031 | Uninduced | 1.559 |
| SRR8749032 | Uninduced | 9.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.158 |
| SRR8400027 | Control - Root | 0.100 |