Gene detail information of Glyur001675s00036198 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75590.1 | 5.00E-42 | SAUR-like auxin-responsive protein family |
| NR | XP_004499236.1 | 7.29E-82 | PREDICTED: auxin-induced protein 6B-like [Cicer arietinum] |
| Swissprot | tr|P33083|AX6B_SOYBN | 6.00E-17 | Auxin-induced protein 6B |
| trEMBL | tr|K7M8L8|K7M8L8_SOYBN | 3.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G40530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01675 | 30660 | 31061 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001675s00036198.1 | PF02519.9 | Auxin_inducible | 7 | 83 | 2.90E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.210 |
| SRR1783600 | control | 9.482 |
| SRR1783602 | moderate drought stress | 4.079 |
| SRR1811619 | moderate drought stress | 3.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.882 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.662 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.835 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.800 |
| SRR2868004 | Drought Stress (root) | 7.812 |
| SRR2967015 | Control (root) | 7.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.249 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.163 |
| SRR9715739 | Root | 0.535 |
| SRR9715742 | Root | 0.854 |
| SRR9715743 | Root | 0.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.224 |
| SRR8749028 | MeJA induced 9h | 16.922 |
| SRR8749029 | MeJA induced 9h | 9.801 |
| SRR8749030 | Uninduced | 20.988 |
| SRR8749031 | Uninduced | 14.349 |
| SRR8749032 | Uninduced | 10.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.144 |
| SRR8400027 | Control - Root | 8.426 |