Gene detail

Gene detail information of Glyur001675s00036196

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G19835.2	Plant protein of unknown function (DUF869)
NR	XP_004499237.1	PREDICTED: filament-like plant protein 4-like [Cicer arietinum]
Swissprot	tr\|Q0WSY2\|FPP4_ARATH	Filament-like plant protein 4
trEMBL	tr\|A0A072VFI4\|A0A072VFI4_MEDTR	Filament-plant-like protein {ECO:0000313\|EMBL:KEH40218.1}

Sequence

Transcript Sequence

>Glyur001675s00036196.1
TGTGTATTTGGAGCTTTTTACAAAAACAAAACGTCCTGCTTTTTAAGAAGGCACCTAATTCCGAATATCTTAGCCTACCCACCACCACACCACACCACACCACACCACCACCTCCACCTCCACCTCCACTCTCTCTGTCTCCAAACACTGCAAAAATCATAATCCTGAGATCTCTCATTGCTTCATTCCATTCACCATTGTTGCAGCCACCGCCAATCGCTCACATTTATTTATTCATTTATTATTTATTTAATTTTCCGGTCTCTGTAATTTGCGATGGACCGACGCTGGCCCTGGAAGAAAAAATCATCTGACAAGGTTGTGCTTGAGAAAGCAGCAGCTGAATTGGACTCTGCTGGTGCTTCCACTCAAGGCAATCAGGATACTTACAAGAAGCCGAACTACGTCCAAATCTCCGTGGAGTCATATTCACATCTTACTGGTCTGGAGGATCAAGTGAAGACATATGAAGAAAAAGTTCAAACACTAGAGGATGAGATCAAGGAATTAAATGAAAAACTGTCAGCAGCAAACTCAGAGATAAATACCAAGGAAACCTTGGTAAAGCAACATGCCAAAGTAGCTGAAGAGGCTGTATCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAACCATCTAGAATCTGTCACTCTTTCAAAACTCACCGCTGAGGACCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATAAGAAACTTGAAGGAAGAACATGAGCAGAAAATACAGGAAGTTGCCCTCACAAAAACCAGGCAATTGGACAAGATTAAGGGTGAGCTTGAGGCTAAGATAGCGAGCTTTGAACAGGAACTCCTCAGGTCTGCTGCTGATAATGCGGCTCTGTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAATCGTGTGAAAGAGAAATCAATTCACTTAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAAATTCGCAACGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAGTGCCAAAGGTTACGTGGTCTTGTACGGAAAAAGTTGCCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAGTCTTGGCCGAGATTATGGAGAAACTCGATTAAGGAAGTCTCCTGTCAAACCTGCTAGTTCTCATTTCTCTTCAATGCCTGAGTTCTCCCTGGAGAATATACAGAAATTCCAGAAAGATAATGAGTTTCTTACAGAGCGCTTATTGGCAACGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCGAAGCGTAACAGTGAATTGCAGGCTTCAAGGAGCATGTGTGCTAAAACACTGAATAAACTTCAAATTTTGGAAGCACAAGCTCAAACAAGTAATCAGCAGAAGGGATCTCCGAAATCTATCATCCATATGAACCACGAAAGCATTTACAGTCAAAATATAAGCAATGCACCAAGCATGATCTCCGTGTCTGAAGATGGAAATGATGATGTGGTAAGTGTTGCCGAGTCTTGGTCAACATCAATGGTCTCTGAGCTATACCAATTCCCAAAAGAAAAGAATACTGAGGAATTGAGCAAATCTGNAGCCACCAAGAAGCTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTAGCTCGATTATCAAATGATTCTAATGGAGACGCCTCTGTTTCATGTACTTCAAACAATAAGACGAACGAAATTGTGACCAATGATGTATCAGAAGTCAGTACCAGCAAAGATGATACCTCTGAGTCTGAAAAGAAGAGTGATTCAAATCCATTGCCAAGTCAAGCGTCTTCTGCCGAAGGATTATTCACACCCAATCCCGGATCTGGTATTGATGGCTTGACACTAGCAGAGATTCGATCAAGAATATTATCAGTTTTTGAGTCTATGGCTAAAGATGCTGATACAGGTAAGATCCTGGAGGATATTAAACATGTTCTTGGAGAAGCACATGACACTTCTATCCAGGACTCTGTAGCTGTCATTCCCCTCGATGCCAAGCCTTCTGATACTCCATGTGATAAGCAGGATAATCCTGAAGATGCTGGTTTAAATGCAGAAAAAGAACTCATTTCATCTCTGAAATCTACAGATTATATGCAGATAACTTCAGATTTAGAAGCGGCAATTTCTCAGATTCATGACTTCATATTGTTCCTAGGCAGAGAAGCAATGACAATTCATGATATATCTTCTGGTGGAGATGGAATAAGCCAAAAGATGGAGGAGTTCTCTGTTACCTATAATAAAGTTAAATGCAATGAAGCAAGTTTGCTACAGTTTGTTCTTGATCTGTCTCATGTCTTGGCTAAAGCAAATGAATTCAGATTTAATGTCCTTGGTTATAAAGGTATGGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAACAAGTTAGTTCAAGACAATCCATCAGGAGAGAGATATGAAAATGGTCATTCCCATATTCTTAATCCGTGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGACCTCAGGCTATGAATCAAATTCCACATCACAAAAGTTCTCCATGGAGGACTTTGAGGAATTGAAATTAGAGAAAGAGAAGGCACTAGTGGATCTGTCAAAATGTTCGGAAAATCTTGAAATTACCAAGTCTCAGTTACTGGAGACCGAGCAATTTCTGGCTGAAGTTAAGTCACAATTGGCTTCTGCCCAAAGGTCAAACAGCTTGGCTGAGACACAACTAAAATGCATGGCAGAGTCATACAGATCACTGGAAACACGTGCACAGGAGTTTGAAACCGAGCTTAATCATCTGCGAATGAAGACAGAAACTCTTGAGAATGAGCTTAAAGATGAAAAAAGGGCTCATGAAGAAGCTTTGGCAAAGTACAAGGAACTAGAAGAACAATTGCAAAGGAGTGAGAGCTCAGCTGCTGAAAAGACTAAACAGGAGAAAGACTTGGCTGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATATCTTCTTGGCAGGCAGCTAAAAGCTCTGCATCCTCAAACAGAGCCAATGGGATCTCCGTTCGGCGAGCGGATTTCGAAGGTTGAAGGCTTCACAGAGCGCGATCCTATTACTGGTAGCCCGAATTTGCAAGAGTTGGATCAGGTGGAGATGGACAGTGCAGCTTCCGGGTTTGTGCAAAGACAGGGTGCAGAGTCCCCCTTGCATTTTTCTAACAGTTTATATAGTCCATCAGATAATGAGTCAAACTTTCAAGCCACATCTCCTGTACATCGTCCAATCCACAAGCCTACTAAGTCAACCTCTTCATCAGCTTCTTCTACCCCTACACCAGAGAAACATGCCCGGGGTTTTAGTAGATTCTTTTCATCAAAAGGAAAAACCGGTCNTTGAGCTTGCAGCATACAGGACCCGTGATGGTAATGACATTTGGAAAGCACCAGCTTGCAAACCCCTTCATGATTTAACAAAATTGAGTTTTTGGGAGGTTTGTGTAGTTAAAGTTGAGGATGGCATGAATGTGAGGTGATATTCTTGTATCTAATGGTGTTGTACATGGTGACCATATGTTTTCTTCTTTTCCGTTTCATTGCCCCCCTTCTCTGTTCTGTAATTTAATTACCAGACATTGACATAGTCTCTGAAATATTACGGGATATGTTGAACATGTTGTATTTCAGAAATTTATGCATAC

Protein Sequence

>Glyur001675s00036196.1
MDRRWPWKKKSSDKVVLEKAAAELDSAGASTQGNQDTYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEIKELNEKLSAANSEINTKETLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHEQKIQEVALTKTRQLDKIKGELEAKIASFEQELLRSAADNAALSRSLQERSNMLIKLSEEKAHAEAEIELLKGNIESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPASSHFSSMPEFSLENIQKFQKDNEFLTERLLATEEETKMLKEALAKRNSELQASRSMCAKTLNKLQILEAQAQTSNQQKGSPKSIIHMNHESIYSQNISNAPSMISVSEDGNDDVVSVAESWSTSMVSELYQFPKEKNTEELSKSXATKKLELMDDFLEVEKLARLSNDSNGDASVSCTSNNKTNEIVTNDVSEVSTSKDDTSESEKKSDSNPLPSQASSAEGLFTPNPGSGIDGLTLAEIRSRILSVFESMAKDADTGKILEDIKHVLGEAHDTSIQDSVAVIPLDAKPSDTPCDKQDNPEDAGLNAEKELISSLKSTDYMQITSDLEAAISQIHDFILFLGREAMTIHDISSGGDGISQKMEEFSVTYNKVKCNEASLLQFVLDLSHVLAKANEFRFNVLGYKGMEAETNSPDCIDKIALPENKLVQDNPSGERYENGHSHILNPCSDPEVPDDGNLTSGYESNSTSQKFSMEDFEELKLEKEKALVDLSKCSENLEITKSQLLETEQFLAEVKSQLASAQRSNSLAETQLKCMAESYRSLETRAQEFETELNHLRMKTETLENELKDEKRAHEEALAKYKELEEQLQRSESSAAEKTKQEKDLAAAAEKLAECQETIYLLGRQLKALHPQTEPMGSPFGERISKVEGFTERDPITGSPNLQELDQVEMDSAASGFVQRQGAESPLHFSNSLYSPSDNESNFQATSPVHRPIHKPTKSTSSSASSTPTPEKHARGFSRFFSSKGKTGX

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01675	122	6081	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001675s00036196.1	PF05911.6	DUF869	92	970	2.70E-252

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	35.038
SRR1783600	control	35.275
SRR1783602	moderate drought stress	43.024
SRR1811619	moderate drought stress	42.803

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	33.441
DRR006520	Root Summer glycyrrhizin high producing strain	32.506
DRR006521	Root Winter glycyrrhizin high producing strain	12.583
DRR006522	Root Winter glycyrrhizin high producing strain	12.195
DRR006523	Root Summer glycyrrhizin low producing strain	17.757
DRR006524	Root Summer glycyrrhizin low producing strain	17.867
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.277
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.348

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	63.847
SRR2868004	Drought Stress (root)	48.288
SRR2967015	Control (root)	43.777

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.311
SRR9715740	Leaf	9.640
SRR9715741	Leaf	5.320
SRR9715739	Root	8.270
SRR9715742	Root	30.390
SRR9715743	Root	27.275

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	148.531
SRR8749028	MeJA induced 9h	84.141
SRR8749029	MeJA induced 9h	88.608
SRR8749030	Uninduced	17.215
SRR8749031	Uninduced	5.537
SRR8749032	Uninduced	5.941

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.907
SRR8400027	Control - Root	39.909