Gene detail information of Glyur001674s00035725.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01380.1 | 6.00E-92 | transferases;sulfuric ester hydrolases;catalytics;transferases |
| NR | KEH22286.1 | 5.80E-117 | phosphatidylinositolglycan class N protein [Medicago truncatula] |
| trEMBL | tr|G7L3B0|G7L3B0_MEDTR | 2.00E-117 | Phosphatidylinositolglycan class N protein {ECO:0000313|EMBL:AES78410.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01674 | 40311 | 41556 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05285 | PIGN | EC:2.7.-.- | Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | map00563 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.292 |
| SRR1783600 | control | 4.516 |
| SRR1783602 | moderate drought stress | 7.801 |
| SRR1811619 | moderate drought stress | 8.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.510 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.621 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.899 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.451 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.645 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.871 |
| SRR2868004 | Drought Stress (root) | 16.876 |
| SRR2967015 | Control (root) | 18.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.374 |
| SRR9715740 | Leaf | 2.889 |
| SRR9715741 | Leaf | 5.407 |
| SRR9715739 | Root | 0.935 |
| SRR9715742 | Root | 10.375 |
| SRR9715743 | Root | 7.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.063 |
| SRR8749028 | MeJA induced 9h | 3.253 |
| SRR8749029 | MeJA induced 9h | 0.427 |
| SRR8749030 | Uninduced | 0.238 |
| SRR8749031 | Uninduced | 0.091 |
| SRR8749032 | Uninduced | 0.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.682 |
| SRR8400027 | Control - Root | 18.194 |