Gene detail information of Glyur001672s00031246.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49690.1 | 6.00E-33 | myb domain protein 84 |
| NR | XP_004498932.1 | 3.00E-102 | PREDICTED: transcription factor RAX2-like [Cicer arietinum] |
| Swissprot | tr|Q9M2Y9|RAX3_ARATH | 1.00E-49 | Transcription factor RAX3 |
| trEMBL | tr|K7MNI7|K7MNI7_SOYBN | 3.00E-93 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G35020.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01672 | 40886 | 42718 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001672s00031246.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 8.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.160 |
| SRR1783600 | control | 0.158 |
| SRR1783602 | moderate drought stress | 0.333 |
| SRR1811619 | moderate drought stress | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.860 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.710 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.409 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.445 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.158 |
| SRR2868004 | Drought Stress (root) | 5.006 |
| SRR2967015 | Control (root) | 5.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.455 |
| SRR9715740 | Leaf | 1.735 |
| SRR9715741 | Leaf | 0.713 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.328 |
| SRR9715743 | Root | 0.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 280.731 |
| SRR8749028 | MeJA induced 9h | 205.199 |
| SRR8749029 | MeJA induced 9h | 215.918 |
| SRR8749030 | Uninduced | 1202.415 |
| SRR8749031 | Uninduced | 1969.584 |
| SRR8749032 | Uninduced | 1211.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.224 |
| SRR8400027 | Control - Root | 1.616 |