Gene detail information of Glyur001654s00037118 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26770.2 | 0 | plectin-related |
| NR | XP_004513217.1 | 0 | PREDICTED: paramyosin-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7LZ89|K7LZ89_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18061.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01654 | 42331 | 51057 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.161 |
| SRR1783600 | control | 8.013 |
| SRR1783602 | moderate drought stress | 7.261 |
| SRR1811619 | moderate drought stress | 7.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.926 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.578 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.482 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.984 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.790 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.972 |
| SRR2868004 | Drought Stress (root) | 18.589 |
| SRR2967015 | Control (root) | 24.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.606 |
| SRR9715740 | Leaf | 6.551 |
| SRR9715741 | Leaf | 5.360 |
| SRR9715739 | Root | 3.555 |
| SRR9715742 | Root | 11.074 |
| SRR9715743 | Root | 9.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.408 |
| SRR8749028 | MeJA induced 9h | 9.901 |
| SRR8749029 | MeJA induced 9h | 6.857 |
| SRR8749030 | Uninduced | 3.061 |
| SRR8749031 | Uninduced | 1.234 |
| SRR8749032 | Uninduced | 1.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.749 |
| SRR8400027 | Control - Root | 21.245 |