Gene detail information of Glyur001652s00038197 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65480.1 | 4.00E-32 | PEBP (phosphatidylethanolamine-binding protein) family protein |
| NR | XP_007151784.1 | 3.92E-46 | hypothetical protein PHAVU_004G074700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SXZ2|FT_ARATH | 2.00E-39 | Protein FLOWERING LOCUS T |
| trEMBL | tr|V7C330|V7C330_PHAVU | 1.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ESW23778.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01652 | 54055 | 57363 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.340 |
| SRR1783600 | control | 0.217 |
| SRR1783602 | moderate drought stress | 0.484 |
| SRR1811619 | moderate drought stress | 0.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.270 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.289 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.652 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.693 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.317 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.388 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.861 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.363 |
| SRR9715740 | Leaf | 9.814 |
| SRR9715741 | Leaf | 11.127 |
| SRR9715739 | Root | 0.118 |
| SRR9715742 | Root | 0.053 |
| SRR9715743 | Root | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.079 |
| SRR8749031 | Uninduced | 0.136 |
| SRR8749032 | Uninduced | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.032 |
| SRR8400027 | Control - Root | 0.029 |