Gene detail information of Glyur001651s00034243 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13990.1 | 0 | exocyst subunit exo70 family protein C2 |
| NR | XP_003553281.1 | 0 | PREDICTED: exocyst complex component EXO70B1-like [Glycine max] |
| Swissprot | tr|Q9FGH9|E70B1_ARATH | 3.00E-111 | Exocyst complex component EXO70B1 |
| trEMBL | tr|I1N7V8|I1N7V8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G26830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01651 | 9184 | 11289 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001651s00034243.1 | PF03081.10 | Exo70 | 321 | 687 | 3.90E-94 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.614 |
| SRR1783600 | control | 4.500 |
| SRR1783602 | moderate drought stress | 1.385 |
| SRR1811619 | moderate drought stress | 1.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.142 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.178 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.548 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.548 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.841 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.021 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.044 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.993 |
| SRR2868004 | Drought Stress (root) | 0.657 |
| SRR2967015 | Control (root) | 0.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.124 |
| SRR9715740 | Leaf | 0.030 |
| SRR9715741 | Leaf | 0.298 |
| SRR9715739 | Root | 1.825 |
| SRR9715742 | Root | 1.772 |
| SRR9715743 | Root | 1.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.891 |
| SRR8749028 | MeJA induced 9h | 0.640 |
| SRR8749029 | MeJA induced 9h | 0.920 |
| SRR8749030 | Uninduced | 0.666 |
| SRR8749031 | Uninduced | 0.964 |
| SRR8749032 | Uninduced | 1.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.709 |
| SRR8400027 | Control - Root | 2.252 |