Gene detail information of Glyur001647s00032306 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|T1MMJ4|T1MMJ4_TRIUA | 1.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_19051-P1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01647 | 11648 | 12709 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.604 |
| SRR1783600 | control | 2.609 |
| SRR1783602 | moderate drought stress | 1.899 |
| SRR1811619 | moderate drought stress | 1.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.356 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.385 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.400 |
| SRR2868004 | Drought Stress (root) | 1.113 |
| SRR2967015 | Control (root) | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.020 |
| SRR9715740 | Leaf | 0.136 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.367 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.472 |
| SRR8749028 | MeJA induced 9h | 0.692 |
| SRR8749029 | MeJA induced 9h | 0.265 |
| SRR8749030 | Uninduced | 1.214 |
| SRR8749031 | Uninduced | 0.690 |
| SRR8749032 | Uninduced | 1.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |