Gene detail information of Glyur001643s00028428 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18800.1 | 2.00E-59 | |
| NR | XP_004502899.1 | 1.97E-107 | PREDICTED: uncharacterized protein LOC101502467 [Cicer arietinum] |
| trEMBL | tr|G7JAX0|G7JAX0_MEDTR | 9.00E-108 | Transmembrane protein, putative {ECO:0000313|EMBL:AES72792.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01643 | 53048 | 53596 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.442 |
| SRR1783600 | control | 17.823 |
| SRR1783602 | moderate drought stress | 6.377 |
| SRR1811619 | moderate drought stress | 6.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.332 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.546 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.227 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.500 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.427 |
| SRR2868004 | Drought Stress (root) | 6.484 |
| SRR2967015 | Control (root) | 7.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.551 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.238 |
| SRR9715739 | Root | 1.776 |
| SRR9715742 | Root | 2.604 |
| SRR9715743 | Root | 1.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.400 |
| SRR8749028 | MeJA induced 9h | 0.401 |
| SRR8749029 | MeJA induced 9h | 0.786 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.325 |
| SRR8400027 | Control - Root | 22.900 |