Gene detail information of Glyur001643s00028423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007207495.1 | 2.34E-25 | hypothetical protein PRUPE_ppa013343mg [Prunus persica] |
| trEMBL | tr|T1M154|T1M154_TRIUA | 4.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_11149-P1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01643 | 44495 | 45425 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.133 |
| SRR1783600 | control | 56.420 |
| SRR1783602 | moderate drought stress | 28.935 |
| SRR1811619 | moderate drought stress | 30.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.740 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.849 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.933 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.409 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.560 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.125 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.378 |
| SRR2868004 | Drought Stress (root) | 32.896 |
| SRR2967015 | Control (root) | 32.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.810 |
| SRR9715740 | Leaf | 0.288 |
| SRR9715741 | Leaf | 4.969 |
| SRR9715739 | Root | 9.869 |
| SRR9715742 | Root | 6.633 |
| SRR9715743 | Root | 7.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.906 |
| SRR8749028 | MeJA induced 9h | 21.746 |
| SRR8749029 | MeJA induced 9h | 32.238 |
| SRR8749030 | Uninduced | 8.138 |
| SRR8749031 | Uninduced | 12.116 |
| SRR8749032 | Uninduced | 16.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 48.930 |
| SRR8400027 | Control - Root | 44.635 |