Gene detail information of Glyur001643s00028417 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45420.1 | 8.00E-59 | Duplicated homeodomain-like superfamily protein |
| NR | AET04694.2 | 8.17E-152 | duplicated homeodomain protein [Medicago truncatula] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 3.00E-06 | Transcription factor DIVARICATA |
| trEMBL | tr|G7LD55|G7LD55_MEDTR | 3.00E-152 | Duplicated homeodomain protein {ECO:0000313|EMBL:AET04694.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01643 | 15286 | 16227 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.650 |
| SRR1783600 | control | 13.448 |
| SRR1783602 | moderate drought stress | 14.813 |
| SRR1811619 | moderate drought stress | 14.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.678 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.831 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.822 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.733 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.236 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.669 |
| SRR2868004 | Drought Stress (root) | 26.423 |
| SRR2967015 | Control (root) | 25.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.668 |
| SRR9715740 | Leaf | 20.624 |
| SRR9715741 | Leaf | 23.351 |
| SRR9715739 | Root | 35.562 |
| SRR9715742 | Root | 32.711 |
| SRR9715743 | Root | 30.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.514 |
| SRR8749028 | MeJA induced 9h | 6.424 |
| SRR8749029 | MeJA induced 9h | 5.312 |
| SRR8749030 | Uninduced | 3.939 |
| SRR8749031 | Uninduced | 1.751 |
| SRR8749032 | Uninduced | 1.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.532 |
| SRR8400027 | Control - Root | 35.605 |