Gene detail information of Glyur001642s00033447 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39170.2 | 6.00E-07 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | NP_001190962.1 | 3.80E-06 | Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana] |
| Swissprot | tr|F4JVA6|SFH6_ARATH | 6.00E-07 | Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 |
| trEMBL | tr|F4JVA7|F4JVA7_ARATH | 1.00E-06 | Sec14p-like phosphatidylinositol transfer family protein {ECO:0000313|EMBL:AEE87032.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01642 | 50166 | 51936 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.932 |
| SRR1783600 | control | 0.628 |
| SRR1783602 | moderate drought stress | 10.747 |
| SRR1811619 | moderate drought stress | 10.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.521 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.106 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.220 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.918 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.121 |
| SRR2967015 | Control (root) | 0.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.101 |
| SRR9715740 | Leaf | 3.011 |
| SRR9715741 | Leaf | 10.707 |
| SRR9715739 | Root | 1.126 |
| SRR9715742 | Root | 2.283 |
| SRR9715743 | Root | 2.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.467 |
| SRR8749028 | MeJA induced 9h | 1.305 |
| SRR8749029 | MeJA induced 9h | 0.794 |
| SRR8749030 | Uninduced | 1.334 |
| SRR8749031 | Uninduced | 0.499 |
| SRR8749032 | Uninduced | 0.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.521 |
| SRR8400027 | Control - Root | 19.368 |