Gene detail information of Glyur001640s00039875 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39740.1 | 2.00E-104 | Nucleotidyltransferase family protein |
| NR | XP_004503175.1 | 0 | PREDICTED: poly(A) RNA polymerase GLD2-like [Cicer arietinum] |
| trEMBL | tr|A0A072UY73|A0A072UY73_MEDTR | 0 | Poly(A) RNA polymerase GLD2-like protein {ECO:0000313|EMBL:KEH34759.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01640 | 3566 | 9307 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.935 |
| SRR1783600 | control | 14.034 |
| SRR1783602 | moderate drought stress | 9.382 |
| SRR1811619 | moderate drought stress | 9.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.458 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.026 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.431 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.315 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.908 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.794 |
| SRR2868004 | Drought Stress (root) | 8.621 |
| SRR2967015 | Control (root) | 7.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.171 |
| SRR9715740 | Leaf | 4.319 |
| SRR9715741 | Leaf | 3.368 |
| SRR9715739 | Root | 1.088 |
| SRR9715742 | Root | 4.236 |
| SRR9715743 | Root | 3.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.808 |
| SRR8749028 | MeJA induced 9h | 15.099 |
| SRR8749029 | MeJA induced 9h | 13.100 |
| SRR8749030 | Uninduced | 5.754 |
| SRR8749031 | Uninduced | 2.208 |
| SRR8749032 | Uninduced | 3.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.265 |
| SRR8400027 | Control - Root | 9.160 |