Gene detail information of Glyur001639s00029617 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01639 | 25249 | 31151 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.134 |
| SRR1783600 | control | 3.744 |
| SRR1783602 | moderate drought stress | 7.608 |
| SRR1811619 | moderate drought stress | 5.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.010 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.866 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.717 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.024 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.097 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.121 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.469 |
| SRR2868004 | Drought Stress (root) | 1.668 |
| SRR2967015 | Control (root) | 1.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.015 |
| SRR9715740 | Leaf | 5.948 |
| SRR9715741 | Leaf | 5.032 |
| SRR9715739 | Root | 0.900 |
| SRR9715742 | Root | 0.867 |
| SRR9715743 | Root | 0.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.639 |
| SRR8749028 | MeJA induced 9h | 0.444 |
| SRR8749029 | MeJA induced 9h | 0.184 |
| SRR8749030 | Uninduced | 0.254 |
| SRR8749031 | Uninduced | 0.080 |
| SRR8749032 | Uninduced | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.972 |
| SRR8400027 | Control - Root | 2.025 |