Gene detail

Gene detail information of Glyur001639s00029615

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G32180.3	9.00E-129	pantothenate kinase 2
NR	XP_004509755.1	0	PREDICTED: pantothenate kinase 2-like [Cicer arietinum]
COG	NP_845240.1	7.00E-10	pantothenate kinase [Bacillus anthracis str. Ames]
Swissprot	tr\|Q0J035\|PANK2_ORYSJ	1.00E-174	Pantothenate kinase 2
trEMBL	tr\|I1KXE5\|I1KXE5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G39370.1}

Sequence

Transcript Sequence

>Glyur001639s00029615.1
CAAACACGTGCATTTTTAGTGCAACTCTTCCGTTTACCACGTGAATCCTAGCTACCTGCTTCCCATTTGTCTTTCTCAGTTTCTCTCCTACTCCCTGTATAATAAACTGTAAATGCCATGAACCCTCATTCAATAGGCTACGCCTACTATTCCTTCTTATTAATTAATTAATTAATTAATTATTGATGATATAGACCATTCTATTCTCGTTTCTTTCAAAACGAGAAACGAATGTGTGAATAATTTATTCTCTCATATCATGGAGGAACGACGAGTTTAGACTTTAATGATTTATCTCATTTAATTACAAAAAAAAAACTATGGATCCCAAAGAGATTCAAACTGAAGCAAATTCGGATCCTAACCCATCAACTCATGTTTATCATCTGGCTTTGGATATTGGAGGATCTCTTGCCAAGCTAGTATACTTCACAAAAGATGATGATCATTTTGTTGATGGTGAGGAGGGGATATCTTCTAGAAAGGCTTTGGAGAAATCCAAAGGCAATANGAACCATCCTGTTCTTAAGGGGAGGCTCAATTTTAAGAAGTTCGAGACTAGCAAGATAAATGATTGCTTAGATTTTATCAAGACCATGAAACTTCATCTTGGAGGTAGTCAGCAGCAAGAAAATCCGGGAAGTCAGCCAATAGCTATTAAGGCCACAGGTGGTGGTGCTTACAAATATGCAGACCTCTTCAAGGAAAGGCTGGGGATAATTCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCAAATTTTCTTCTTGAGGTGGTACACCAGGAAGCCTTCACCTATATCGGNGATCAAAAGCAATTCGTGCAGATTGACCAAAATGATCTGTATCCCTACCTTCTTGTTAATATTGGGTCTGGTGTTGGCATGATCAAGGTGGAAGGAGATGGAAAGTTCGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTGGGAAAGCTTTTAACCAATTTTGATGAGTTGCTGGAATTAAGTTATCAGGGCAACAACAGAGCGGTAGATATGCTTGTTGGCGACATTTATGGTGGAATGGACTATTCAAAGATTGGTCTTTCATCAACTGCAATAGCCTCTAGTTTTGGAAAGGCAATTTCTGATAATAAGGAGCGTGAAGATTTCAAACCTGAAGATATTGCTCGATCTCTTCTAAGAATGATCTCAAATAATATTGGACAGATCTCTTACTTAAATGCCCTTCGATTTGGGCTGAAGAGGATATTTTTTGGGGGATTTTTTATTCGCAGGCATCCTTTTACAATGGACACACTATCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCAAAGGCAATGTTCTTGCGGCATGAAGGGTTCCTTGGAGCTGTGGGTGCCTTCATGAGTTCTGACAAGCATGGCCTCAAGGAATTGTTGGTCAATCAAGTGGCGCAGCAAACTCCCACCAAGTTATCCTTTGCTGTGGATAAAATACATGGTCCACTAGATGGGGAATTAAATGGAGATGAAAGTATAGAGTGCAGTGTCTATGCAGCTTAGACGAAGCAATGGTTCGTTGCTTGCATGATTTGTAGTTGTAACTTATATAATTTGATTATGTAAAATGGTTGAAAGTAATAGCTACAAGAAGTTATTGTTTCACACTCACACTCGAAGCATTGTATTGTATAACAGCCAATGATTTGTATTAATACACAAACTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01639	11658	17673	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K09680	coaW	EC:2.7.1.33	Pantothenate and CoA biosynthesis	map00770

Gene Ontology

biological_process
GO:0015937 coenzyme A biosynthetic process

molecular_function

GO:0004594 pantothenate kinase activity

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001639s00029615.1	PF03630.9	Fumble	22	359	7.40E-134

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.509
SRR1783600	control	18.676
SRR1783602	moderate drought stress	12.870
SRR1811619	moderate drought stress	12.800

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	28.208
DRR006520	Root Summer glycyrrhizin high producing strain	28.083
DRR006521	Root Winter glycyrrhizin high producing strain	13.661
DRR006522	Root Winter glycyrrhizin high producing strain	13.557
DRR006523	Root Summer glycyrrhizin low producing strain	27.925
DRR006524	Root Summer glycyrrhizin low producing strain	28.234
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.128
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.030

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.116
SRR2868004	Drought Stress (root)	57.967
SRR2967015	Control (root)	56.920

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	32.621
SRR9715740	Leaf	36.506
SRR9715741	Leaf	39.276
SRR9715739	Root	4.844
SRR9715742	Root	17.130
SRR9715743	Root	16.086

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.607
SRR8749028	MeJA induced 9h	22.098
SRR8749029	MeJA induced 9h	14.033
SRR8749030	Uninduced	31.842
SRR8749031	Uninduced	20.227
SRR8749032	Uninduced	16.546

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	52.598
SRR8400027	Control - Root	44.187