Gene detail information of Glyur001639s00029614 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70480.2 | 8.00E-100 | Domain of unknown function (DUF220) |
| NR | KEH20026.1 | 0 | OBP32pep, putative [Medicago truncatula] |
| trEMBL | tr|A0A072TS56|A0A072TS56_MEDTR | 0 | OBP32pep, putative {ECO:0000313|EMBL:KEH20026.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01639 | 7449 | 11356 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001639s00029614.1 | PF02713.9 | DUF220 | 170 | 242 | 1.30E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.934 |
| SRR1783600 | control | 3.882 |
| SRR1783602 | moderate drought stress | 3.733 |
| SRR1811619 | moderate drought stress | 3.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.333 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.408 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.303 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.522 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.632 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.628 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.705 |
| SRR2868004 | Drought Stress (root) | 7.162 |
| SRR2967015 | Control (root) | 9.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.855 |
| SRR9715740 | Leaf | 6.314 |
| SRR9715741 | Leaf | 11.195 |
| SRR9715739 | Root | 2.098 |
| SRR9715742 | Root | 4.817 |
| SRR9715743 | Root | 4.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.861 |
| SRR8749028 | MeJA induced 9h | 4.276 |
| SRR8749029 | MeJA induced 9h | 2.278 |
| SRR8749030 | Uninduced | 6.547 |
| SRR8749031 | Uninduced | 1.495 |
| SRR8749032 | Uninduced | 2.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.031 |
| SRR8400027 | Control - Root | 8.937 |