Gene detail information of Glyur001630s00027446


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07910.11.00E-82Leucine-rich repeat (LRR) family protein
NRAFK34885.15.52E-149unknown [Medicago truncatula]
COGYP_007058022.11.00E-29hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
Swissprottr|B9F655|PIRL7_ORYSJ9.00E-103Plant intracellular Ras-group-related LRR protein 7
trEMBLtr|I3S3P3|I3S3P3_MEDTR2.00E-149Uncharacterized protein {ECO:0000313|EMBL:AFK34885.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold016305406660548-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001630s00027446.1PF00560.28LRR_123430.11
Glyur001630s00027446.1PF12799.2LRR_445831.20E-08
Glyur001630s00027446.1PF12799.2LRR_4911292.40E-08
Glyur001630s00027446.1PF13855.1LRR_81371956.40E-10
Glyur001630s00027446.2PF00560.28LRR_123430.11
Glyur001630s00027446.2PF12799.2LRR_445831.20E-08
Glyur001630s00027446.2PF12799.2LRR_4911292.40E-08
Glyur001630s00027446.2PF13855.1LRR_81371956.40E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.274
SRR1783600control11.806
SRR1783602moderate drought stress5.816
SRR1811619moderate drought stress5.427

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.153
DRR006520Root Summer glycyrrhizin high producing strain8.367
DRR006521Root Winter glycyrrhizin high producing strain13.154
DRR006522Root Winter glycyrrhizin high producing strain11.336
DRR006523Root Summer glycyrrhizin low producing strain12.771
DRR006524Root Summer glycyrrhizin low producing strain12.049
DRR006525Leaf Summer glycyrrhizin high producing strain5.872
DRR006526Leaf Summer glycyrrhizin high producing strain6.645

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)17.984
SRR2868004Drought Stress (root)28.757
SRR2967015Control (root)23.568

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf33.299
SRR9715740Leaf20.250
SRR9715741Leaf41.768
SRR9715739Root1.972
SRR9715742Root7.508
SRR9715743Root7.036

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.913
SRR8749028MeJA induced 9h50.847
SRR8749029MeJA induced 9h47.733
SRR8749030Uninduced33.587
SRR8749031Uninduced42.694
SRR8749032Uninduced34.966

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root16.086
SRR8400027Control - Root17.741

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved