Gene detail information of Glyur001630s00027445 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26580.1 | 1.00E-64 | |
| NR | XP_003522999.1 | 0 | PREDICTED: uncharacterized protein LOC100793553 [Glycine max] |
| Swissprot | tr|Q9LDD4|ARID2_ARATH | 9.00E-24 | AT-rich interactive domain-containing protein 2 |
| trEMBL | tr|K7KW47|K7KW47_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21780.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01630 | 47350 | 50882 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.222 |
| SRR1783600 | control | 29.598 |
| SRR1783602 | moderate drought stress | 33.072 |
| SRR1811619 | moderate drought stress | 33.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 54.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 51.975 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.917 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.588 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.760 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.796 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.917 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.590 |
| SRR2868004 | Drought Stress (root) | 85.173 |
| SRR2967015 | Control (root) | 85.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.826 |
| SRR9715740 | Leaf | 33.520 |
| SRR9715741 | Leaf | 51.157 |
| SRR9715739 | Root | 30.161 |
| SRR9715742 | Root | 53.590 |
| SRR9715743 | Root | 51.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 81.429 |
| SRR8749028 | MeJA induced 9h | 130.339 |
| SRR8749029 | MeJA induced 9h | 84.914 |
| SRR8749030 | Uninduced | 113.018 |
| SRR8749031 | Uninduced | 139.895 |
| SRR8749032 | Uninduced | 98.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.442 |
| SRR8400027 | Control - Root | 51.325 |